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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015887738.1_cds_XP_016442233.1_37517
CDS Infomation

[gene=LOC107767669] [db_xref=GeneID:107767669] [protein=L-ascorbate oxidase-like] [protein_id=XP_016442233.1] [location=join(38546..38797,39833..39925,40392..40604,42037..42231,43954..44022,44718..45016,45788..46382)] [gbkey=CDS]
Sequence

ATGTCTCCATTAGCCATCATCTTCTTGTTGTTGTTGTTAACAATTTCAGCCATGGCCAAA
ACAAGGCAATTTGAATGGAGAGTGGAGTACATGCATTGGTCTCCAGATGGTGTAGAGGGT
GTGGTAATGGCTATTAATGGAAAGTTTCCTGGTCCAACTATTAGGGCAAGAACTGGTGAT
ACTATTTCTGTTGAGCTTACTAACAATCTTCTTACTGAAGGACTTGTCATTCACTGGCAT
GGAATTTCACAGCGTGGAACACCATGGGCGGATGGAACTGCATCAATCTCCCAATGTCCC
ATTAACCCTGGAGAGACATTTGTTTACAGGTTTATAGTTGATAAGGCGGGGACATATTTC
TACCATGGACATTATGGGATGCAAAGATCAGCAGGATTATATGGTTCACTTATAGTGGAA
TTAGCAAAAAATGAGAAAGAACCCTTTCATTATGATGGAGAATTTAATTTATTACTTAGT
GATTGGTGGCACAAAAGTTCCCAAGATCAACAAATTGACATCTCTTCTAAGCCTTTTCGT
TGGATTGGTGAACCACAGAGTTTATTGATGAATGGAAGAGGTCAATTTAATTGTTCTCTA
GCGGCGCAATTTAGCAAATCACCCATTCCTCAGTGCAAGTTAAGAGGAGATGAGCAGTAC
GCACCCCACATTTTTCACGTGCATCCAAACAAGACTTACAGGCTTAGAGTGGCTAGCAGC
ACTGCTTTGTCTTCACTCCACTTAGCCGTTGGGGGTCACAAAATGGTGGTGGTTGAAGCA
GATGGAAACTACATTCAACCATTTTCTGTAGAAAATATGGACATTTATTCAGGTGAAAGC
TATTCAATTCTCTTCACAACTGATCAAGATCCTTCAAACAACTACTGGATTTCAATAAGT
GTAAGAGGAAGAGAACCTAAAACACCTCAAGGCCTCACTATATTGAACTACATTCCAAAT
TTTGCTTCAAAAATTCCAAATTTTCCACCACCATTGCCACCTCTTTGGAATGATTATAAC
TACAGCAAATCCTTCTCTAAGAAAATCTTTGGCTTGATGGGGTCTCCCAAGCCGCCAACT
CGACACGATCGTCGTCTTTTTCTCCTCAACACGCAGAACAGGATTGAAGGATACACCAGA
TGGGCTATCAACAACATTTCCTTAGTTTTTCCCACTACACCATATTTGGGATCAATCAAA
TATGGCATAAACAATGCATTTGACACAAAATCTCCACCAAATACCTTTTCCAAAGACTAT
GATATCATGAAACCACCACCAAACCCTAATTCTACTTATGGAAATGGTGTTTACATGTTG
AAATTCAATACCACCATTGACATAATCCTTCAAAATGCCAATATCTTAGCTGAAAACGTC
AGTGAAATTCACCCTTGGCATTTCCATGGACATAGTTTTTGGGTTTTAGGGTATGGAGAC
GGAAATTTTACAACAGAAGATGCTGAGACGACGCTCAATTTGAATAATCCCCCGTTGAGG
AATACAGTTGTGGTTTTTCCCTATGGATGGACTGCACTAAGATTTTCCGCGGATAATCCT
GGGGTTTGGGCTTTTCATTGTCATATTGAACCTCATTTGCATATGGGCATGGGAGTTGTC
TTTGCTGAAGGTGTTCATCTTGTCAAGAATATACCTAATGAAGCTCTCACTTGTGGTTTG
ACAGGCAAAATGTTTGCTGAAAACAAGCATAAATAG

Peptide Sequence

PEP ID

XP_016442233.1
PEP Infomation

PREDICTED: L-ascorbate oxidase-like [Nicotiana tabacum]
Sequence

MSPLAIIFLLLLLTISAMAKTRQFEWRVEYMHWSPDGVEGVVMAINGKFPGPTIRARTGD
TISVELTNNLLTEGLVIHWHGISQRGTPWADGTASISQCPINPGETFVYRFIVDKAGTYF
YHGHYGMQRSAGLYGSLIVELAKNEKEPFHYDGEFNLLLSDWWHKSSQDQQIDISSKPFR
WIGEPQSLLMNGRGQFNCSLAAQFSKSPIPQCKLRGDEQYAPHIFHVHPNKTYRLRVASS
TALSSLHLAVGGHKMVVVEADGNYIQPFSVENMDIYSGESYSILFTTDQDPSNNYWISIS
VRGREPKTPQGLTILNYIPNFASKIPNFPPPLPPLWNDYNYSKSFSKKIFGLMGSPKPPT
RHDRRLFLLNTQNRIEGYTRWAINNISLVFPTTPYLGSIKYGINNAFDTKSPPNTFSKDY
DIMKPPPNPNSTYGNGVYMLKFNTTIDIILQNANILAENVSEIHPWHFHGHSFWVLGYGD
GNFTTEDAETTLNLNNPPLRNTVVVFPYGWTALRFSADNPGVWAFHCHIEPHLHMGMGVV
FAEGVHLVKNIPNEALTCGLTGKMFAENKHK

Transcript Sequence

Gene sequence data has not been registered.